List of Publications

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Genomic Databases and Softwares: In pursuit of Biological relevance through Bioinformatics. 
M. Kaushik, M. Kumar, S. Chaudhary, S. Mahendru, S. Kukreti
Advanced Techniques in Biology & Medicine (2016) [Accepted].
Link not available

Advancements in Characterization Techniques of Biopolymers: Cyclic Voltammetry, Gel Electrophoresis, Circular Dichroism and Fluorescence Spectroscopy. 
M. Kaushik, S. Mahendru, M. Kumar, S. Chaudhary, S. Kukreti
Advanced Techniques in Biology & Medicine (2016) [Accepted].
Link not available

Peptide Biomarkers: Exploring the Diagnostic Aspect. 
S. Mahendru, K. Roy, S. Kukreti
Current Protein and Peptide Science (2016) [Accepted].
Link to paper

New Cancer Therapeutics: Noscapine and Analogs.
V. Tomar, R. Chandra, S. Prakash, J. Madan , S. Kukreti
Current Topics in Medicinal Chemistry (2016) doi: 10.2174/1568026616666160530153518.[Epub Ahead of Print]
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Structure-Specific Ligand Recognition of Multistranded DNA Structures.
M. Kaushik, A. Singh, M. Kumar, S. Chaudhary, S. Ahmed, S. Kukreti
Current Topics in Medicinal Chemistry (2016) doi: 10.2174/1568026616666160530154239.[Epub Ahead of Print]
Link to paper

Protein engineering and de novo designing of a biocatalyst.
M. Kaushik, P. Sinha, P. Jaiswal, S. Mahendru,K. Roy, S. Kukreti
Journal of Molecular Recognition (2016) doi: 10.1002/jmr.2546.[Epub Ahead of Print]
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Genetic contribution of CYP1A1 variant on treatment outcome in epilepsy patients: a functional and interethnic perspective.
P. Talwar, N. Kanojia, S. Mahendru, R. Baghel, S. Grover, G. Arora, G. K. Grewal, S. Parween, A. Srivastava, M. Singh, S. Vig, S. Kushwaha, S. Sharma, K. Bala, Indian Genome Variation Consortium, S. Kukreti, R Kukreti
The Pharmacogenomics Journal (2016) doi:10.1038/tpj.2016.1. [Epub Ahead of Print]
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Binding of ethyl pyruvate to bovine serum albumin: Calorimetric, spectroscopic and molecular docking studies.
M. Pathak, R. Mishra, P. K. Agarwala, H. Ojha, B. Singh, A. Singh, S. Kukreti
Thermochimica Acta (2016) 633: 140-8.
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Synthesis, preclinical evaluation and molecular modelling of macrocyclic appended 1-(2-methoxyphenyl)piperazine for 5-HT1A neuroreceptor imaging.
P. P. Hazari, S. Prakash, V. K. Meena, N. Singh, K. Chuttani, N. Chadha, P. Singh, S. Kukreti, A. K. Mishra
RSC Advances (2016) 6(9): 7288-301.
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General Techniques for Biomolecular Characterization.
S. Kaushik, S. Kukreti
Imperial Journal of Interdisciplinary Research (2016) 2(6): 998-1002.
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A bouquet of DNA structures: Emerging diversity.
M. Kaushik, S. Kaushik, K. Roy, A. Singh, S. Mahendru, M. Kumar, S. Chaudhary, S. Ahmed, S. Kukreti
Biochemistry and Biophysics Reports (2016)

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Exploring the characterization tools of Guanine-Quadruplexes.
M. Kaushik, S. Kaushik, S. Kukreti
Frontiers in bioscience (Landmark edition) (2016) 21: 468-478.
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Design, Synthesis, and Biological Evaluation of 1, 2-Dihydroisoquinolines as HIV-1 Integrase Inhibitors.
V. Tandon, P. Yadav, S. Sur, S. Abbat, V. Tiwari, R. Hewer, M. A. Papathanasopoulos, R. Raja, A. C. Banerjea, A. K. Verma, S. Kukreti, P. V. Bharatham
ACS medicinal chemistry letters (2015) 6(10): 1065-70.
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Comparative In Vitro Binding Studies of TiCl2(dpme)2, Ti(ada)2(bzac)2, and TiCl2(bzac)(bpme) Titanium Complexes with Calf-Thymus DNA.
P. Awasthi, N. Kumar, R. Kaushal, M. Kumar, S. Kukreti
Biochemistry Research International (2015) 2015: Article ID 836928.
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Differential structural status of the RNA counterpart of an undecamer quasi-palindromic DNA sequence present in LCR of human β-globin gene cluster.
M. Kaushik, S. Kukreti
Journal of Biomolecular Structure and Dynamics (2015) 33(2): 244-52.
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Protection Against Ionizing Radiation Induced Oxidative Damage to Structural and Functional Proteins by Semiquinone Glucoside Derivative Isolated from Radioresistant Bacterium Bacillus sp. INM-1
S. Mishra, A. K. Gupta, P. Malhotra, P. K. Singh, R. Pathak, A. Singh, S. Kukreti, H. K. Gautam, S. Javed, R. Kumar
Current Biotechnology (2014) 3(1): 117-26.
Link to paper

Advancement in the Structural Polymorphism of G-Quadruplexes
M. Kaushik, S. Kaushik, S. Kukreti
International review of biophysical chemistry (2014) 5(2): 37-46.
Link to paper

In-silico engineering of intrinsically conducting copolymers using particle swarm optimization algorithm.
P. Thakral, V. Arora, S. Kukreti, A. K. Bakshi
Indian Journal of Chemistry-A (2013) 52A: 317-26.
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A short GC-rich palindrome of human mannose receptor gene (MRC2) coding region, displays a conformational switch.
A. Bansal, M. Prasad, K. Roy, S. Kukreti
Biopolymers (2012) 97(12): 950-62.
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Structural Diversity and Specific Recognition of four stranded G-quadruplex DNA.
M. Kaushik, S. Kaushik, A. Bansal, S. Saxena, S. Kukreti
Current Molecular Medicine (2011) 11(9): 744-69.

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Presence of Divalent Cation is not Mandatory for the Formation of intramolecular purine-motif triplex containing human c-jun protooncogene target. 
S. Kaushik, M. Kaushik, F. Svinarchuk, C. Malvy, S. Fermandjian,  S. Kukreti
Biochemistry (2011) 50(19): 4132-42.
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Structural Transition from Dimeric to tetrameric i-motif, caused by the presence of TAA at the 3′-end of human telomeric C-rich sequence.
M. Kaushik, M. Prasad, S. Kaushik, A. Singh, S. Kukreti
Biopolymers (2010) 93 (2): 156-160.
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Structural polymorphism at LCR and its role in beta-globin gene regulation.    
S. Kukreti, H. Kaur, M. Kaushik, A. Bansal, S. Saxena, S. Kaushik, R. Kukreti     
Biochimie (2010), 92(9): 1199-1206.

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Structural polymorphism exhibited by a homopurine.homopyrimidine sequence found at the right end of human c-jun protooncogene. 
S. Saxena, A. Bansal, S. Kukreti
Archives of biochemistry and biophysics (2008) 47(2): 95-108. 
Link to paper

Possibility of an Antiparallel (Tetramer) Quadruplex Exhibited by the Double Repeat of the Human Telomere. 
M. Kaushik, A. Bansal, S. Saxena, S. Kukreti
Biochemistry (2007) 46(24): 7119–31.
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Structural polymorphism exhibited by a quasipalindrome present in the locus control region(LCR) of the human -β globin gene cluster.
M. Kaushik and S. Kukreti
Nucleic Acids Research (2006) 34 (12): 3511–3522.
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Reaction of artemisinin with haemoglobin: implications for antimalarial activity.    
R. Kannan, K. Kumar, D. Sahal, S. Kukreti, V.S.Chauhan  
Biochemical Journal (2005) 385 (2): 409-18.

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Hairpin-Duplex equilibrium reflected in A→B transition in an undecamer quasi-palindrome present in locus control region (LCR) of Human β-globin gene cluster.
M. Kaushik, R. Kukreti, D. Grover, S.K.Brahmachari, S. Kukreti
Nucleic Acids Research (2003) 31 (23): 6904-15.
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Temperature induced hyperchromism exhibited by Hoechst 33258: Evidence of drug aggregation from UV-Melting method. 
M. Kaushik and S. Kukreti
Spectrochimica Acta, Part A (2003) 59(13): 3123-29.
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Triple helices formed at oligopyrimidine·oligopurine sequences with base pair inversions: Effect of a triplex-specific ligand on stability and selectivity. 
S. Kukreti, J.S. Sun, E.Bisagni, T.Garestier and C.Helene 
Nucleic Acids Research (1998), 26(9): 2179-83.
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Rational design of a triple helix specific intercalating ligand 
C.Escude, C.Nguyen, S. Kukreti, J.S.Sun, E.Bisagni, T.Garestier and C.Helene
Proceedings of the National Academy of Sciences, USA (1998) 95(7): 3591-96.
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Extension of the range of DNA sequences available for triple helix formation :Stabilization of mismatched triplexes by Acridine-containing oligonucleotides
S. Kukreti, J.S.Sun, T.Garestier and C.Helene. 
Nucleic Acid Research (1997) 25(21): 4264-4270.
Link not available

A 500 MHz Proton NMR Study Of Interaction Of tetrapeptide Lys-Trp.-Gly-Lys Otbu and tripeptide Lys-Tyr-Lys with Deoxynucleotide dGpC. 
R.Barthwal, S. Kukreti, A.Mujeeb and G.Govil. 
Magnetic Resonance In Biology And Medicine (1995) 2: 225-230.
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Hairpin Formation in d-AAGCTTAAGCTT Under High Salt Conditions Shows Unusual Properties. 
K.B.Roy, S. Kukreti, V.S.Chauhan and M.R.Rajeswari. 
Journal of Biomolecular Structure and Dynamics (1994) 11(5): 1041-1048.
Link not available

A 500 MHz Proton NMR Study of interaction of Tetrapeptide Lys-Trp.-Gly-Lys Otbu With Deoxynucleotide d- CpG. 
R. Barthwal, G. Govil, S. K. Singh, S. Kukreti and A. Mujeeb. 
Magnetic Resonance In Biology And Medicine (1994) 1: 17-22.
Link to paper

A 500 MHz Proton NMR Study of the Interaction of Tetrapeptide Lys-Tyr-Lys With the Tetra Deoxynucleotides d-CpCpGpG and d-CpGpCpG. 
R. Barthwal, S. Kukreti, A. Mujeeb and G. Govil.
MAGMA (Germany), (1993) 1: 145-157.
Link to paper

A 500 MHz proton NMR study of interaction of tripeptides Lys-Tyr-Lys and Lys-Phe-Lys with deoxydinucleotide d-CpG. 
R. Barthwal, S. Kukreti, A. Mujeeb 
Indian journal of biochemistry & biophysics (1992) 29(5):394-401.
Link to paper

Hairpin And Duplex forms of a self complementary dodecamer d-AGATCTAGATCT and interaction of the Duplex form with a Peptide KGWGK;Can a pentapeptide destabilize DNA ?
K. B. Roy, S. Kukreti, H. S. Bose, V. S. Chauhan and M. R. Rajeshwari. 
Biochemistry (1992) 31(27): 6241-6245.
Link to paper

Binding of Oligopeptide to d-AGATCTAGATCT and d-AAGCTTAAGCTT: Can Tryptophan Intercalate in DNA-Hairpin ? 
M. R. Rajeshwari, H. S. Bose, S. Kukreti, A. Gupta, V. S. Chauhan and K. B. Roy 
Biochemistry (1992) 31(27), 6237-41.
Link to paper

A 500 MHz proton NMR study of stacking interactions: Binding of tripeptide Lys-Tyr-Lys to tetradeoxynucleotide d-GpCpGpC
R. Barthwal, A. Mujeeb, S. Kukreti, A. Gupta, G. Govil 
Journal of Molecular Recognition (1991) 4(2-3): 45-52.
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Proton magnetic resonance studies of the binding of oligopeptides containing tryptophan to polyribonucleotides poly A, poly U and poly C. 
R. Barthwal, G. Lancelot, A. Agarwal, A. Mujeeb S. Kukreti 
Physiological chemistry and physics and medical NMR (1988) 20(2):145-157.
Link to paper

Interaction of tryptophan containing oligopeptide with d-CpGpCpG by proton NMR. 
R. Barthwal, A. Agarwal, S. Kukreti, A. Mujeeb 
Physiological chemistry and physics and medical NMR (1987) 19(2):125-139.

 

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