Parbati Biswas Group

Theory and Simulation Lab

Department of Chemistry

Publications

61. S. Gupta and P. Biswas, 2018, Effect of pH on size and internal structure of Poly(Propylene Imine) dendrimers: A molecular dynamics simulation study, J. Phys. Chem. B, 122, 9250 (5-year Impact Factor: 3.528)

60. L. Aggarwal and P. Biswas, 2018, Hydration water distribution around intrinsically disordered proteins, J. Phys. Chem. B, 122, 4206 (5-year Impact Factor: 3.528)

59. S. Basu and P. Biswas, 2018, Salt-bridge dynamics in intrinsically disordered proteins: A trade-off between electrostatic interactions and structural flexibility, Biochim. Biophys. Acta, Proteins Proteomics, 1866, 624 (5-year Impact Factor: 2.879)

58. V. Singh and P. Biswas, 2018, Estimating the mean first passage time of protein misfolding, Phys. Chem. Chem. Phys., 20, 5692 (5-year Impact Factor: 4.219)

57. S. Sharma and P. Biswas, 2018, Hydration water dynamics around a protein surface: a first passage time approach, J. Phys.: Condens. Matter., 30, 035101 (5-year Impact Factor: 2.507)

56. G. J. Rai and P. Biswas, 2017, Topology driven structural transition of dendrimers with a dimensional cross-over, Polymer, 115, 118 (5-year Impact Factor: 3.775)

55. A. Kumar, A. Baruah and P. Biswas, 2017, Role of local and nonlocal interactions in folding and misfolding of globular proteins, J. Chem. Phys., 146, 065102 (5-year Impact Factor: 3.017)

54. A. Baruah and P. Biswas, 2016, Globular-Disorder transition in proteins: A compromise between hydrophobic and electrostatic interactions?, Phys. Chem. Chem. Phys., 18, 23207 (5-year Impact Factor: 4.219)

53. G. J. Rai, A. Kumar and P. Biswas, 2016, Dynamics of dendrimers with excluded volume: A comparison with experiments and simulations, J. Rheol., 60, 111 (5-year Impact Factor: 3.195)

52. P. Rani and P. Biswas, 2015, Diffusion of hydration water around intrinsically disordered proteins, J. Phys. Chem. B, 119, 13262 (5-year Impact Factor: 3.528)

51. A. Baruah, P. Rani and P. Biswas, 2015, Conformational entropy of intrinsically disordered proteins from amino acid triads, Sci. Rep., 5, 11740 (5-year Impact Factor: 5.597)

50. A. Baruah and P. Biswas, 2015, Designing pH induced fold switch in proteins, J. Chem. Phys., 142, 185102 (5-year Impact Factor: 3.017)

49. G. J. Rai, A. Kumar and P. Biswas, 2015, Effect of excluded volume on the rheology and transport dynamics of randomly hyperbranched polymers, J. Chem. Phys., 142, 174906 (5-year Impact Factor: 3.017)

48. P. Rani and P. Biswas, 2015, Local structure and dynamics of hydration water in intrinsically disordered proteins, J. Phys. Chem. B, 119, 10858 (5-year Impact Factor: 3.528)

47. P. Rani, A. Baruah and P. Biswas, 2014, Does lack of secondary structure imply intrinsic disorder in proteins? A sequence analysis, Biochim. Biophys. Acta, Proteins Proteomics, 1844, 1827 (5-year Impact Factor: 2.879)

46. G. J. Rai, A. Kumar and P. Biswas, 2014, Intramolecular relaxation of flexible dendrimers with excluded volume, J. Chem. Phys., 141, 034902 (5-year Impact Factor: 3.017)

45. P. Rani and P. Biswas, 2014, Shape dependence of the radial distribution function of hydration water around proteins, J. Phys.: Condens. Matter., 26, 335102 (5-year Impact Factor: 2.507)

44. A. Baruah and P. Biswas, 2014, The role of site-directed point mutations in protein misfolding, Phys. Chem. Chem. Phys., 16, 13964. (5-year Impact Factor : 4.219)

43. N. Rawat and P. Biswas, 2014, Hydrogen bond dynamics in intrinsically disordered proteins, J. Phys. Chem. B, 118, 3018. (5-year Impact Factor: 3.528)

42. A. Baruah and P. Biswas, 2014, Designing sequences with varied flexibility and stability through pair mutations, RSC Adv., 4, 8031. (5-year Impact Factor : 3.907)

41. A. Kumar and P. Biswas, 2013, Orientational relaxation in semiflexible dendrimers, Phys. Chem. Chem. Phys., 15, 20294. (5-year Impact Factor : 4.219)

40. N. Bhattacharjee and P. Biswas, 2013, Helical ambivalency induced by point mutations, BMC Struct. Biol., 13, 9. (5-year Impact Factor : 2.096)

39. A. Kumar, G. J. Rai and P. Biswas, 2013, Conformation and intramolecular relaxation dynamics of semiflexible randomly hyperbranched polymers, J. Chem. Phys., 138, 104902. (5-year Impact Factor : 3.017)

38. N. Bhattacharjee, P. Rani and P. Biswas, 2013, Capturing molten globule state of α- lactalbumin through constant pH molecular dynamics simulations, J. Chem. Phys., 138, 095101. (5-year Impact Factor : 3.017)

37. A. Kumar and P. Biswas, 2013, Semiflexibility induced range of conformations in dendrimers, Soft Matter (Communication), 9, 2375. (5-year Impact Factor : 4.289)

36. S. Chaudhary, M. K. Seth, I. D. Vats, K. Kumar, P. Biswas, J. Karar, M. E. Hussain, M. A. Q. Pasha and S. Pasha, 2013, Sulphur containing angiotensin converting enzyme inhibitor-3-thienylalanine-orinthyl-proline activates endothelial function and expression of genes involved in renin angiotensin system, J. Cardiovasc. Pharm., 61, 311. (5-year Impact Factor: 2.243)

35. A. Kumar and P. Biswas, 2012, Conformational transitions in semiflexible dendrimers induced by bond orientations, J. Chem. Phys., 137, 124903. (5-year Impact Factor : 3.017)

34. N. Rawat and P. Biswas, 2012, Hydrophobic moments, shape, and packing in disordered proteins, J. Phys. Chem. B, 116, 6326. (5-year Impact Factor : 3.528)

33. A. Baruah, A. Bhattacherjee and P. Biswas, 2012, Role of conformational heterogeneity on protein misfolding, Soft Matter, 8, 4432. (5-year Impact Factor : 4.289)

32. N. Bhattacharjee and P. Biswas, 2012, Are ambivalent α-helices entropically driven? Protein Eng. Des. Sel., 25, 73. (5-year Impact Factor : 2.604)

31. N. Bhattacharjee and P. Biswas, 2011, Local order and mobility of water molecules, J. Phys. Chem. B, 115, 12257. (5-year Impact Factor : 3.528)

30. N. Bhattacharjee and P. Biswas, 2011, Structure of hydration water in proteins: A comparison of molecular dynamics simulations and database analysis, Biophys. Chem., 158, 73. (5-year Impact Factor : 2.002)

29. A. Kumar and P. Biswas, 2011, Intramolecular relaxation dynamics in semiflexible dendrimers, J. Chem. Phys., 134, 214901. (5-year Impact Factor : 3.017)

28. N. Rawat and P. Biswas, 2011, Shape, flexibility and packing of proteins and nucleic acids in complexes, Phys. Chem. Chem. Phys., 13, 9632. (5-year Impact Factor : 4.219)

27. P. Biswas and A. Bhattacherjee, 2011, Role of foldability and stability in designing real protein sequences, Phys. Chem. Chem. Phys., 13, 9223. (5-year Impact Factor : 4.219)

26. A. Bhattacherjee and P. Biswas, 2011, Designing misfolded sequences by energy landscaping, J. Phys. Chem. B, 115, 113. (5-year Impact Factor : 3.528)

25. N. Bhattacharjee and P. Biswas, 2010, Statistical analysis and molecular dynamics simulations of ambivalent α-helices, BMC Bioinformatics, 11, 519. (5-year Impact Factor : 3.452)

24. N. Bhattacharjee and P. Biswas,, 2010, Position-specific propensities of amino acids in the β-strand, BMC Struct. Biol., 10, 29. (5-year Impact Factor : 2.096)

23. A. Kumar and P. Biswas, 2010, Dynamics of semiflexible dendrimers in dilute solutions, Macromolecules, 43, 7378. (5-year Impact Factor : 5.654)

22. A. Bhattacherjee and P. Biswas, 2010, Neutrality and evolvability of designed protein sequences, Phys. Rev. E, 82, 011906. (5-year Impact Factor : 2.269)

21. A. Bhattacherjee and P. Biswas, 2009, Statistical theory of protein sequence designs by random mutation, J. Phys. Chem. B, 113, 5520. (5-year Impact Factor : 3.528)

20. A. Bhattacherjee and P. Biswas, 2009, Combinatorial design of protein sequences with applications to real and lattice proteins, J. Chem. Phys., 131, 125101. (5-year Impact Factor : 3.017)

19. N. Bhattacharjee and P. Biswas, 2009, Structural patterns in α-Helices and β-Sheets in globular proteins, Protein Pept. Lett., 16, 953. (5-year Impact Factor : 1.124)

18. N. Rawat and P. Biswas, 2009, Size, shape and flexibility of proteins and DNA, J. Chem. Phys., 131, 165104. (5-year Impact Factor : 3.017)

17. A. Bhattacherjee and P. Biswas, 2009, Statistical theory of neutral protein evolution by random site mutations, J. Chem. Sci., 121, 887. (5-year Impact Factor : 1.421)

16. Snehlata, I. D. Vats, M. Chopra, P. Biswas and S. Pasha, 2009, Effect of varying chain length between P1 and P1’ position of of tripeptidomimics on activity of angiotensin converting enzyme inhibitors, Bioorg. Med. Chem. Lett., 19, 4364. (5-year Impact Factor : 2.317)

15. K. Hanif, Snehalata, M.C. Pavar, E. Arif, P. Biswas, M. Fahim, M. A. Pasha and S. Pasha, 2009, Effect of 3-thienylalamine-ornithine-proline, new Sulphur-containing angiotesin-converting enzyme inhibition on blood pressure and oxide stress in spontaneously hypertensive rats, J. Cardiovasc. Pharm., 53, 145. (5-year Impact Factor : 2.243)

14. S. Mukherjee, A. Saha, P. Biswas, C. Mandal and K. Ray, 2008, Structural analysis protein variants of factor IX to predict functional aberration haemophilia B, Haemophilia, 14, 1076. (5-year Impact Factor: 2.584)

13. A. Sharma, S. Chavali, A. Mahajan, P. Biswas and D. Bharadwaj, 2008, Multiple substitution at single site: interpreting the effect of Asn92 mutations in human coagulation factor IX, Haemophilia, 14, 396. (5-year Impact Factor: 2.584)

12. M. Vidyasagar et. Al, 2007, Biosuite: A comprehensive bioinformatics software package (a unique industry-academia collaboration), Current Sci., 92, 29. (5-year Impact Factor: 0.944)

11. P. Biswas, J. Zou and J. G. Saven, 2005, Statistical theory for protein ensembles with designed energy landscapes, J. Chem. Phys., 123, 154908. (5-year Impact Factor: 3.017)

10. P. Biswas, R. Kant and A. Blumen, 2001, Stretch dynamics of flexible dendritic polymers in solution, J. Chem. Phys., 114, 2430. (5-year Impact Factor: 3.017)

9. P. Biswas, R. Kant and A. Blumen, 2000, Polymer dynamics and topology: Extension of stars and dendrimers in external fields, Macromol. Theory Simul., 9, 56. (5-year Impact Factor: 1.559)

8. R. Kant, P. Biswas and A. Blumen, 2000, Hydrodynamic effects on the extension of stars and dendrimers in external fields, Macromol. Theory Simul., 9, 608. (5-year Impact Factor: 1.559)

7. T. C. B. McLeish et. al, 1999, Dynamics of entangled H-polymers: Theory, rheology and neutron-scattering, Macromolecules, 32, 6734. (5-year Impact Factor: 5.654)

6. P. Biswas, A. Paramekanti and B. J. Cherayil, 1996, Shapes of generalized random walks, J. Chem. Phys., 104, 3360. (5-year Impact Factor: 3.017)

5. P. Biswas, A. Paramekanti and B. J. Cherayil, 1995, Polymers below the theta point: Renormalization group considerations, J. Chem. Phys., 103, 7562. (5-year Impact Factor: 3.017)

4. P. Biswas and B. J. Cherayil, 1995, Dynamics of fractional brownian walks, J. Phys. Chem., 99, 816. (5-year Impact Factor: 3.528)

3. P. Biswas and B. J. Cherayil, 1994, Radial dimensions of starburst polymers, J. Chem. Phys., 100, 3201. (5-year Impact Factor: 3.017)

2. P. Biswas and B. J. Cherayil, 1994, Chain dimensions near the critical point, J. Chem. Phys., 100, 4665. (5-year Impact Factor: 3.017)

1. B. J. Cherayil and P. Biswas, 1993, Path integral description of polymers using fractional Brownian walks, J. Chem. Phys., 99, 9230. (5-year Impact Factor: 3.017)

© Parbati Biswas